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https://forum.hdfgroup.org/t/cmake-zlib-dependency-not-properly-propagted-by-hdf5-targets/5149/2
Mar 09, 2019 · zlib in hdf5 is private and static because zlib is used internally and hdf5 does not have a requirement to expose the zlib interface. The requirement for zlib linking should be then under downstream application control.
http://hdf-forum.184993.n3.nabble.com/How-to-build-HDF5-with-ZLib-and-SZIP-td4028327.html
How to build HDF5 with ZLib and SZIP ?. Hello, How to build HDF5 (1.8.15) with ZLib and SZIP (on Ubuntu-14.04) ? With this (called within a bash script where $1 is a path to the final install...
https://www.hdfgroup.org/tag/zlib/
HDF5 Data Compression Demystified #1. Elena Pourmal, The HDF Group What happened to my compression? One of the most powerful features of HDF5 is the ability to compress or otherwise modify, or “filter,” your data during I/O. By far, the most common user-defined filters are …
https://github.com/grimbough/Rhdf5lib/issues/15
Feb 26, 2019 · Sleuth reads kallisto-created HDF5 files, and kallisto uses gz compression to keep the files small, thus zlib compression is required. @johanneskoester did some excellent work creating a bioconda recipe (bioconda/bioconda-recipes#12780) to include a test case and make sure zlib compression is available.
https://dtcenter.org/met-online-tutorial-metv8-0/tutorial-setup/compilation/required-libraries
The GNU Scientific Library ()NCEP's BUFRLIB v10.2.3 NCEP's GRIB2 C-Library (optional) The HDF5 library is required to support NetCDF 4 (which is also required). HDF5 should be built with zlib. The HDF and HDF-EOS libraries for using the MODIS-Regrid tool (optional) The Cairo and FreeType libraries for using the MODE-Graphics tool (optional)
https://www.hdfgroup.org/2015/04/hdf5-data-compression-demystified-1/
HDF5 Data Compression Demystified #1 Elena Pourmal, The HDF Group What happened to my compression? One of the most powerful features of HDF5 is the ability to compress or otherwise modify, or “filter,” your data during I/O.
https://stackoverflow.com/questions/44684848/error-zlib-library-and-headers-are-required-r-on-hpc
Installing R is a more suitable question for super user stack exchange. It would be pretty amazing if Red Hat does not have a repository with an up to date version of R as an RPM. – lmo Jun 21 '17 at 19:42
https://confluence.hdfgroup.org/display/support/Building+HDF5+with+CMake
The binaries by default will include the static HDF5 C and C++ libraries, as well as the SZIP and ZLIB external libraries. Please NOTE that they will NOT include the HDF5 Fortran library. See the How to Change HDF5 CMake Build Options page for instructions on building with Fortran.
https://confluence.hdfgroup.org/display/support/How+to+Change+HDF5+CMake+Build+Options
If using the CTest script and configuration method to build HDF5, you can easily change the build options by either specifying the options on the command line or adding them to the options file, HDF5options.cmake.
https://www.unidata.ucar.edu/support/help/MailArchives/netcdf/msg13261.html
Aug 24, 2015 · Hi Phil, > I've been trying the various compilation options for NetCDF with version > 4 support for a couple of days without success. It seems that no matter > how I attempt to do this I am presented with the message below when > executing ./configure: > > checking for library containing H5Fflush... no > configure: error: Can't find or link to the hdf5 library.
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